Product Details

SNP ID

rs200354490

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.17:76736978 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CCTCAGCGTCGCGCTTGTCGTGAAA[A/G]CGAACGAAGGCGAAGCCGCGGGACT

Phenotype

MIM: 615262 MIM: 600813

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

METTL23 PubMed Links

Additional Information

For this assay, SNP(s) [rs237057] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

METTL23

Gene Name

methyltransferase like 23

There are no transcripts associated with this gene.

Gene

MFSD11

Gene Name

major facilitator superfamily domain containing 11

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001242532.1	434	Intron			NP_001229461.1
NM_001242533.1	434	Intron			NP_001229462.1
NM_001242534.1	434	UTR 5			NP_001229463.1
NM_001242535.1	434	Intron			NP_001229464.1
NM_001242536.1	434	Intron			NP_001229465.1
NM_001242537.1	434	Intron			NP_001229466.1
NM_024311.3	434	Intron			NP_077287.1
XM_011525236.2	434	Intron			XP_011523538.1
XM_011525237.2	434	Intron			XP_011523539.2
XM_011525238.2	434	Intron			XP_011523540.2
XM_011525239.2	434	Intron			XP_011523541.2
XM_011525240.2	434	Intron			XP_011523542.2
XM_011525241.2	434	Intron			XP_011523543.2
XM_011525242.1	434	Intron			XP_011523544.1
XM_011525244.1	434	Intron			XP_011523546.1
XM_011525247.2	434	Intron			XP_011523549.2
XM_017025065.1	434	Intron			XP_016880554.1
XM_017025066.1	434	Intron			XP_016880555.1
XM_017025067.1	434	Intron			XP_016880556.1
XM_017025068.1	434	Intron			XP_016880557.1
XM_017025069.1	434	Intron			XP_016880558.1
XM_017025070.1	434	Intron			XP_016880559.1
XM_017025071.1	434	Intron			XP_016880560.1

Gene

MIR636

Gene Name

microRNA 636

There are no transcripts associated with this gene.

Gene

SRSF2

Gene Name

serine and arginine rich splicing factor 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001195427.1	434	Silent Mutation	CGC,CGT	R61R	NP_001182356.1
NM_003016.4	434	Silent Mutation	CGC,CGT	R61R	NP_003007.2
XM_017024942.1	434	Silent Mutation	CGC,CGT	R61R	XP_016880431.1

View Full Product Details