Product Details

SNP ID

rs1801833

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.17:81117553 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TCCCCACCATCCCTCTCCCTGTAGG[C/T]AGGAGCCCCCCAACACTGACTGCGG

Phenotype

MIM: 605276 MIM: 605475 MIM: 614059

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

AATK PubMed Links

Additional Information

For this assay, SNP(s) [rs200561995] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

AATK

Gene Name

apoptosis associated tyrosine kinase

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001080395.2	4899	UTR 3			NP_001073864.2
NM_004920.2	4899	UTR 3			NP_004911.2
XM_006722193.2	4899	UTR 3			XP_006722256.1
XM_006722194.2	4899	UTR 3			XP_006722257.1
XM_006722195.2	4899	UTR 3			XP_006722258.1
XM_006722196.2	4899	UTR 3			XP_006722259.1
XM_011525509.2	4899	UTR 3			XP_011523811.1
XM_011525510.2	4899	UTR 3			XP_011523812.1
XM_011525511.2	4899	UTR 3			XP_011523813.1
XM_017025421.1	4899	UTR 3			XP_016880910.1
XM_017025422.1	4899	UTR 3			XP_016880911.1

Gene

BAIAP2

Gene Name

BAI1 associated protein 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001144888.1	4899	Intron			NP_001138360.1
NM_006340.2	4899	Intron			NP_006331.1
NM_017450.2	4899	Intron			NP_059344.1
NM_017451.2	4899	Intron			NP_059345.1
XM_005256943.1	4899	Intron			XP_005257000.1
XM_005256944.1	4899	Intron			XP_005257001.1
XM_005256945.1	4899	Intron			XP_005257002.1
XM_005256948.3	4899	Intron			XP_005257005.1
XM_006721635.1	4899	Intron			XP_006721698.1
XM_006721636.1	4899	Intron			XP_006721699.1
XM_006721637.2	4899	Intron			XP_006721700.1
XM_011524193.1	4899	Intron			XP_011522495.1
XM_011524194.1	4899	Intron			XP_011522496.1
XM_011524195.1	4899	Intron			XP_011522497.1
XM_011524196.1	4899	Intron			XP_011522498.1
XM_011524197.1	4899	Intron			XP_011522499.1
XM_017024017.1	4899	Intron			XP_016879506.1
XM_017024018.1	4899	Intron			XP_016879507.1
XM_017024019.1	4899	Intron			XP_016879508.1

Gene

MIR3065

Gene Name

microRNA 3065

There are no transcripts associated with this gene.

Gene

MIR338

Gene Name

microRNA 338

There are no transcripts associated with this gene.

Gene

MIR657

Gene Name

microRNA 657

There are no transcripts associated with this gene.

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