Product Details

SNP ID

rs2739202

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.4:110617566 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TTCAGAAACATCATTGCATCCACCA[C/G]AGAAACTATTCTAAAACTGATATTC

Phenotype

MIM: 601542

Polymorphism

C/G, Transversion Substitution

Allele Nomenclature

Literature Links

PITX2 PubMed Links

Additional Information

For this assay, SNP(s) [rs75911264] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PITX2

Gene Name

paired like homeodomain 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_000325.5	2964	UTR 3			NP_000316.2
NM_001204397.1	2964	UTR 3			NP_001191326.1
NM_001204398.1	2964	UTR 3			NP_001191327.1
NM_001204399.1	2964	UTR 3			NP_001191328.1
NM_153426.2	2964	UTR 3			NP_700475.1
NM_153427.2	2964	UTR 3			NP_700476.1
XM_011532027.2	2964	UTR 3			XP_011530329.1

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