Product Details

SNP ID

rs2129820

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.3:57068819 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TTCCCCTAACTTTCCATGTGCACAC[A/G]CACGCACACACCCCCCTCACTAAAG

Phenotype

MIM: 612115 MIM: 609869

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

ARHGEF3 PubMed Links

Additional Information

For this assay, SNP(s) [rs80242482] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

ARHGEF3

Gene Name

Rho guanine nucleotide exchange factor 3

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001128615.1		Intron			NP_001122087.1
NM_001128616.1		Intron			NP_001122088.1
NM_001289698.1		Intron			NP_001276627.1
NM_019555.2		Intron			NP_062455.1
XM_005265186.4		Intron			XP_005265243.1
XM_005265187.3		Intron			XP_005265244.1
XM_011533764.1		Intron			XP_011532066.1
XM_011533765.1		Intron			XP_011532067.1
XM_011533766.2		Intron			XP_011532068.1
XM_011533767.1		Intron			XP_011532069.1
XM_017006502.1		Intron			XP_016861991.1
XM_017006503.1		Intron			XP_016861992.1
XM_017006504.1		Intron			XP_016861993.1
XM_017006505.1		Intron			XP_016861994.1
XM_017006506.1		Intron			XP_016861995.1

Gene

SPATA12

Gene Name

spermatogenesis associated 12

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_181727.1		Intron			NP_859078.1
XM_011533676.2		Intron			XP_011531978.1

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