Product Details

SNP ID

rs6898962

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.5:33988130 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TCTGATGGCACCCGGATTAGATTGT[A/G]GAATCTACCCCTTCCTCACATGCCT

Phenotype

MIM: 604489 MIM: 606202

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

AMACR PubMed Links

Additional Information

For this assay, SNP(s) [rs150664086] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

AMACR

Gene Name

alpha-methylacyl-CoA racemase

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001167595.1	1459	UTR 3			NP_001161067.1
NM_014324.5	1459	UTR 3			NP_055139.4
NM_203382.2	1459	UTR 3			NP_976316.1

Gene

C1QTNF3-AMACR

Gene Name

C1QTNF3-AMACR readthrough (NMD candidate)

There are no transcripts associated with this gene.

Gene

SLC45A2

Gene Name

solute carrier family 45 member 2

There are no transcripts associated with this gene.

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