Product Details

SNP ID

rs12257301

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.10:86655778 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CTCAAAAACTGTCTTGGGCCCTTGG[A/G]CTGGAGTCCATACTGCAGGCAGGGA

Phenotype

MIM: 605906 MIM: 606665

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

LDB3 PubMed Links

Additional Information

For this assay, SNP(s) [rs12257300] are located under a probe and SNP(s) [rs34790909] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LDB3

Gene Name

LIM domain binding 3

There are no transcripts associated with this gene.

Gene

OPN4

Gene Name

opsin 4

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001030015.2		Intron			NP_001025186.1
NM_033282.3		Intron			NP_150598.1
XM_017016955.1		Intron			XP_016872444.1
XM_017016956.1		Intron			XP_016872445.1
XM_017016957.1		Intron			XP_016872446.1

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