Product Details

SNP ID

rs12112854

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.7:122319780 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TGGTCCGAACTGACTTCTCACAATG[C/T]TGCATTATGAGAAATATGTATCTCG

Phenotype

MIM: 609978 MIM: 613301

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

CADPS2 PubMed Links

Additional Information

For this assay, SNP(s) [rs75643376] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CADPS2

Gene Name

calcium dependent secretion activator 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001009571.3	4433	UTR 3			NP_001009571.2
NM_001167940.1	4433	UTR 3			NP_001161412.1
NM_017954.10	4433	UTR 3			NP_060424.9
XM_005250695.4	4433	UTR 3			XP_005250752.1
XM_005250696.4	4433	UTR 3			XP_005250753.1
XM_005250697.4	4433	UTR 3			XP_005250754.1
XM_005250698.4	4433	UTR 3			XP_005250755.1
XM_005250699.4	4433	UTR 3			XP_005250756.1
XM_005250700.4	4433	UTR 3			XP_005250757.1
XM_005250701.4	4433	UTR 3			XP_005250758.1
XM_005250702.4	4433	UTR 3			XP_005250759.1
XM_005250703.4	4433	UTR 3			XP_005250760.1
XM_005250704.4	4433	UTR 3			XP_005250761.1
XM_005250705.4	4433	UTR 3			XP_005250762.1
XM_005250706.4	4433	UTR 3			XP_005250763.1
XM_005250707.4	4433	UTR 3			XP_005250764.1
XM_005250708.3	4433	UTR 3			XP_005250765.1
XM_011516695.2	4433	UTR 3			XP_011514997.1
XM_011516696.2	4433	UTR 3			XP_011514998.1
XM_011516697.2	4433	UTR 3			XP_011514999.1
XM_017012794.1	4433	UTR 3			XP_016868283.1
XM_017012795.1	4433	UTR 3			XP_016868284.1
XM_017012796.1	4433	UTR 3			XP_016868285.1
XM_017012797.1	4433	UTR 3			XP_016868286.1
XM_017012798.1	4433	UTR 3			XP_016868287.1
XM_017012799.1	4433	UTR 3			XP_016868288.1
XM_017012800.1	4433	UTR 3			XP_016868289.1

Gene

FEZF1

Gene Name

FEZ family zinc finger 1

There are no transcripts associated with this gene.

Gene

FEZF1-AS1

Gene Name

FEZF1 antisense RNA 1

There are no transcripts associated with this gene.

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