Product Details

SNP ID

rs4627342

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.16:55511625 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GAGAGAAGGCCACCCAATGGAGATG[A/T]CATATTACCAAATGGAAATATGATG

Phenotype

MIM: 612040 MIM: 120360

Polymorphism

A/T, Transversion Substitution

Allele Nomenclature

Literature Links

LPCAT2 PubMed Links

Additional Information

For this assay, SNP(s) [rs77658879] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LPCAT2

Gene Name

lysophosphatidylcholine acyltransferase 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_017839.4		Intron			NP_060309.2
XM_005256006.2		Intron			XP_005256063.1
XM_011523169.2		Intron			XP_011521471.1
XM_017023376.1		Intron			XP_016878865.1

Gene

MMP2

Gene Name

matrix metallopeptidase 2

There are no transcripts associated with this gene.

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