Product Details

SNP ID
rs121909517
Assay Type
Functionally Tested
NCBI dbSNP Submissions
NA
Location
Chr.17:4899036 on Build GRCh38
Set Membership
Context Sequence [VIC/FAM]
GCCTCCTGATCTCTCGTGCTCTCGG[G/C]CACGAAGTTCACGGCATCCACACAG
Phenotype
MIM: 100725 MIM: 609426
Polymorphism
G/C, Transversion Substitution
Allele Nomenclature
Literature Links
C17orf107 PubMed Links
Additional Information
For this assay, SNP(s) [rs33978919] are located under a probe and SNP(s) [rs55681486] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene
C17orf107
Gene Name
chromosome 17 open reading frame 107
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_001145536.1 1321 Intron NP_001139008.1
Gene
CHRNE
Gene Name
cholinergic receptor nicotinic epsilon subunit
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_000080.3 1321 Missense Mutation CCC,GCC P431A NP_000071.1
XM_017024115.1 1321 Missense Mutation CCC,GCC P419A XP_016879604.1
Gene
MINK1
Gene Name
misshapen like kinase 1
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_001024937.3 1321 Intron NP_001020108.1
NM_001321236.1 1321 Intron NP_001308165.1
NM_015716.4 1321 Intron NP_056531.1
NM_153827.4 1321 Intron NP_722549.2
NM_170663.4 1321 Intron NP_733763.1
XM_006721531.2 1321 Intron XP_006721594.1
XM_006721532.2 1321 Intron XP_006721595.1
XM_006721536.2 1321 Intron XP_006721599.1
XM_011523906.1 1321 Intron XP_011522208.1
XM_017024704.1 1321 Intron XP_016880193.1
XM_017024705.1 1321 Intron XP_016880194.1
XM_017024706.1 1321 Intron XP_016880195.1
XM_017024707.1 1321 Intron XP_016880196.1
XM_017024708.1 1321 Intron XP_016880197.1

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