Product Details

SNP ID

rs34131529

Assay Type

Functionally tested

NCBI dbSNP Submissions

NA

Location

Chr.12:25108660 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

TGCTTCCTCAGAAGCAAAATCCTTC[A/C]CCATGTGATATAAAGTAGAATGAAA

Phenotype

MIM: 616906 MIM: 602003

Polymorphism

A/C, Transversion substitution

Allele Nomenclature

Literature Links

CASC1 PubMed Links

Gene Details

Gene

CASC1

Gene Name

cancer susceptibility candidate 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001082972.2	2220	UTR 3			NP_001076441.1
NM_001082973.2	2220	Missense Mutation	GGG,GTG	G680V	NP_001076442.1
NM_001204101.2	2220	Missense Mutation	GGG,GTG	G621V	NP_001191030.1
NM_001204102.2	2220	Missense Mutation	GGG,GTG	G640V	NP_001191031.1
NM_001319977.1	2220	UTR 3			NP_001306906.1
NM_001319978.1	2220	Missense Mutation	GGG,GTG	G640V	NP_001306907.1
NM_018272.4	2220	Missense Mutation	GGG,GTG	G686V	NP_060742.3
XM_005253406.1	2220	Missense Mutation	GGG,GTG	G744V	XP_005253463.1
XM_005253408.1	2220	Missense Mutation	GGG,GTG	G568V	XP_005253465.1
XM_005253409.1	2220	Missense Mutation	GGG,GTG	G568V	XP_005253466.1
XM_006719101.1	2220	Missense Mutation	GGG,GTG	G638V	XP_006719164.1
XM_011520723.1	2220	Missense Mutation	GGG,GTG	G744V	XP_011519025.1
XM_011520726.1	2220	Intron			XP_011519028.1
XM_011520727.1	2220	Intron			XP_011519029.1
XM_017019560.1	2220	Missense Mutation	GGG,GTG	G738V	XP_016875049.1
XM_017019561.1	2220	Missense Mutation	GGG,GTG	G640V	XP_016875050.1
XM_017019562.1	2220	UTR 3			XP_016875051.1
XM_017019563.1	2220	Missense Mutation	GGG,GTG	G580V	XP_016875052.1
XM_017019564.1	2220	Missense Mutation	GGG,GTG	G574V	XP_016875053.1
XM_017019565.1	2220	UTR 3			XP_016875054.1
XM_017019566.1	2220	Missense Mutation	GGG,GTG	G534V	XP_016875055.1
XM_017019567.1	2220	Missense Mutation	GGG,GTG	G515V	XP_016875056.1
XM_017019568.1	2220	UTR 3			XP_016875057.1

Gene

LRMP

Gene Name

lymphoid restricted membrane protein

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001204126.1	2220	Intron			NP_001191055.1
NM_001204127.1	2220	Intron			NP_001191056.1
NM_006152.3	2220	Intron			NP_006143.2
XM_005253370.3	2220	Intron			XP_005253427.1
XM_005253372.2	2220	Intron			XP_005253429.1
XM_005253374.3	2220	Intron			XP_005253431.1
XM_006719076.2	2220	Intron			XP_006719139.1
XM_011520667.1	2220	Intron			XP_011518969.1
XM_011520668.2	2220	Intron			XP_011518970.1
XM_011520669.2	2220	Intron			XP_011518971.1
XM_011520670.1	2220	Intron			XP_011518972.1
XM_017019300.1	2220	Intron			XP_016874789.1
XM_017019301.1	2220	Intron			XP_016874790.1
XM_017019302.1	2220	Intron			XP_016874791.1

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