Product Details

SNP ID

rs5743681

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.11:72003642 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TGCTCCCACGCCCCTGTCTGGATCC[C/T]CTCCCTTGTGAGCCCCAGGGTTATC

Phenotype

MIM: 604113 MIM: 164009

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

IL18BP PubMed Links

Additional Information

For this assay, SNP(s) [rs74546834] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

IL18BP

Gene Name

interleukin 18 binding protein

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001039659.1		Intron			NP_001034748.1
NM_001039660.1		Intron			NP_001034749.1
NM_001145055.1		Intron			NP_001138527.1
NM_001145057.1		Intron			NP_001138529.1
NM_005699.3		Intron			NP_005690.2
NM_173042.2		Intron			NP_766630.2
NM_173044.2		Intron			NP_766632.2
XM_017017059.1		Intron			XP_016872548.1
XM_017017060.1		Intron			XP_016872549.1
XM_017017061.1		Intron			XP_016872550.1
XM_017017062.1		Intron			XP_016872551.1
XM_017017063.1		Intron			XP_016872552.1

Gene

NUMA1

Gene Name

nuclear mitotic apparatus protein 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001286561.1		Intron			NP_001273490.1
NM_006185.3		Intron			NP_006176.2
XM_006718564.1		Intron			XP_006718627.1
XM_011545054.1		Intron			XP_011543356.1
XM_011545055.1		Intron			XP_011543357.1
XM_011545056.2		Intron			XP_011543358.1
XM_011545057.2		Intron			XP_011543359.1
XM_011545058.1		Intron			XP_011543360.1
XM_011545059.2		Intron			XP_011543361.1
XM_011545060.2		Intron			XP_011543362.1
XM_011545061.2		Intron			XP_011543363.1
XM_011545062.2		Intron			XP_011543364.1
XM_011545063.2		Intron			XP_011543365.1
XM_011545064.1		Intron			XP_011543366.1
XM_011545065.1		Intron			XP_011543367.1
XM_011545066.1		Intron			XP_011543368.1
XM_017017830.1		Intron			XP_016873319.1
XM_017017831.1		Intron			XP_016873320.1

Gene

RNF121

Gene Name

ring finger protein 121

There are no transcripts associated with this gene.

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