Product Details

SNP ID

rs62625012

Assay Type

Functionally tested

NCBI dbSNP Submissions

NA

Location

Chr.7:100197868 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CACACGCCTGGAGCTCTTCACCAGC[C/T]GCTTCAAGGTAAAATGGGTGGTGCT

Phenotype

MIM: 608489

Polymorphism

C/T, Transition substitution

Allele Nomenclature

Literature Links

GATS PubMed Links

Gene Details

Gene

GATS

Gene Name

GATS, stromal antigen 3 opposite strand

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_178831.6	1276	Intron			NP_849153.3
XM_017012153.1	1276	Intron			XP_016867642.1
XM_017012154.1	1276	Intron			XP_016867643.1
XM_017012155.1	1276	Intron			XP_016867644.1
XM_017012156.1	1276	Intron			XP_016867645.1
XM_017012157.1	1276	Intron			XP_016867646.1
XM_017012158.1	1276	Intron			XP_016867647.1
XM_017012159.1	1276	Intron			XP_016867648.1

Gene

STAG3

Gene Name

stromal antigen 3

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001282716.1	1276	Missense Mutation	CGC,TGC	R386C	NP_001269645.1
NM_001282717.1	1276	Missense Mutation	CGC,TGC	R386C	NP_001269646.1
NM_001282718.1	1276	Missense Mutation	CGC,TGC	R328C	NP_001269647.1
NM_012447.3	1276	Missense Mutation	CGC,TGC	R386C	NP_036579.2
XM_011515742.1	1276	Missense Mutation	CGC,TGC	R386C	XP_011514044.1
XM_017011683.1	1276	Missense Mutation	CGC,TGC	R386C	XP_016867172.1
XM_017011684.1	1276	Missense Mutation	CGC,TGC	R386C	XP_016867173.1
XM_017011685.1	1276	Missense Mutation	CGC,TGC	R386C	XP_016867174.1
XM_017011686.1	1276	Missense Mutation	CGC,TGC	R386C	XP_016867175.1
XM_017011687.1	1276	Missense Mutation	CGC,TGC	R328C	XP_016867176.1

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