Product Details

SNP ID

rs27079

Assay Type

Validated

NCBI dbSNP Submissions

NA

Location

Chr.5:66148138 on Build GRCh38

Set Membership

Validated

Context Sequence [VIC/FAM]

GCATTTAGTGGGTAAATGTTAGCAA[C/T]TTATAAGTAGTCTTAAACAGGATGA

Phenotype

MIM: 609268

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

SREK1 PubMed Links

Additional Information

For this assay, SNP(s) [rs57904365] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

SREK1

Gene Name

splicing regulatory glutamic acid and lysine rich protein 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001077199.2		Intron			NP_001070667.1
NM_001270492.1		Intron			NP_001257421.1
NM_001323527.1		Intron			NP_001310456.1
NM_001323529.1		Intron			NP_001310458.1
NM_001323533.1		Intron			NP_001310462.1
NM_001323534.1		Intron			NP_001310463.1
NM_001323535.1		Intron			NP_001310464.1
NM_139168.3		Intron			NP_631907.1
XM_011543171.2		Intron			XP_011541473.1
XM_017009055.1		Intron			XP_016864544.1
XM_017009056.1		Intron			XP_016864545.1

View Full Product Details