Product Details

SNP ID

rs11639329

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.15:55540218 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

AGTACCAAGTAAACAGCATTCAAGT[C/T]CTTGAATCAATGGCTAAAAATTCCA

Phenotype

MIM: 606902

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

LOC107984745 PubMed Links

Additional Information

For this assay, SNP(s) [rs117471766] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LOC107984745

Gene Name

uncharacterized mitochondrial protein AtMg00860-like

There are no transcripts associated with this gene.

Gene

PYGO1

Gene Name

pygopus family PHD finger 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_015617.2	7460	UTR 3			NP_056432.1
XM_005254300.4	7460	UTR 3			XP_005254357.1
XM_011521446.2	7460	UTR 3			XP_011519748.1

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