Product Details

SNP ID

rs796860

Assay Type

Functionally Tested

NCBI dbSNP Submissions

68

Location

Chr.1:183555720 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TTGGGTGTCTTGTTTTTGTAAGATG[A/C]TAGGTTTTTTTTTATTGTGGTATGA

Phenotype

MIM: 608515 MIM: 610964

Polymorphism

A/C, Transversion Substitution

Allele Nomenclature

Literature Links

NCF2 PubMed Links

Additional Information

For this assay, SNP(s) [rs543935249] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

NCF2

Gene Name

neutrophil cytosolic factor 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_000433.3	2254	UTR 3			NP_000424.2
NM_001127651.2	2254	UTR 3			NP_001121123.1
NM_001190789.1	2254	UTR 3			NP_001177718.1
NM_001190794.1	2254	UTR 3			NP_001177723.1
XM_005245207.1	2254	UTR 3			XP_005245264.1
XM_011509580.1	2254	UTR 3			XP_011507882.1
XM_011509581.1	2254	UTR 3			XP_011507883.1

Gene

SMG7

Gene Name

SMG7, nonsense mediated mRNA decay factor

There are no transcripts associated with this gene.

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