Product Details

SNP ID
rs1530031
Assay Type
DME
NCBI dbSNP Submissions
NA
Location
Chr.2:100392864 on Build GRCh38
Set Membership
HapMap DME Validated Inventoried
Context Sequence [VIC/FAM]
CCACCAGTGATGGGTGAAGCCACCC[C/T]GACTAGCCAGGAGAACCTCAGGGGC
Phenotype
MIM: 606376
Polymorphism
C/T, Transition substitution
Allele Nomenclature
Literature Links
CHST10 PubMed Links
Additional Information
For this assay, SNP(s) [rs115167757] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene
CHST10
Gene Name
carbohydrate sulfotransferase 10
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_004854.4 2174 UTR 3 NP_004845.1
XM_011512207.1 2174 UTR 3 XP_011510509.1
XM_011512208.1 2174 UTR 3 XP_011510510.1
XM_011512210.1 2174 UTR 3 XP_011510512.1
XM_011512211.1 2174 UTR 3 XP_011510513.1
XM_011512212.1 2174 UTR 3 XP_011510514.1
XM_017005380.1 2174 UTR 3 XP_016860869.1
XM_017005381.1 2174 UTR 3 XP_016860870.1
XM_017005382.1 2174 UTR 3 XP_016860871.1
XM_017005383.1 2174 UTR 3 XP_016860872.1

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