Product Details

SNP ID

rs11627121

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.14:105327343 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GGTCAGTGCCTGCCGCTACTGCCTG[C/T]TGCGCTGACTGCCTGAGCACTGGGG

Phenotype

MIM: 610423

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

PACS2 PubMed Links

Additional Information

For this assay, SNP(s) [rs115288673] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PACS2

Gene Name

phosphofurin acidic cluster sorting protein 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001100913.2		Intron			NP_001094383.2
NM_001243127.2		Intron			NP_001230056.1
NM_015197.3		Intron			NP_056012.2
XM_006720090.1		Intron			XP_006720153.1
XM_006720091.1		Intron			XP_006720154.1
XM_006720092.2		Intron			XP_006720155.1
XM_017021105.1		Intron			XP_016876594.1
XM_017021106.1		Intron			XP_016876595.1
XM_017021107.1		Intron			XP_016876596.1
XM_017021108.1		Intron			XP_016876597.1
XM_017021109.1		Intron			XP_016876598.1
XM_017021110.1		Intron			XP_016876599.1
XM_017021111.1		Intron			XP_016876600.1
XM_017021112.1		Intron			XP_016876601.1

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