Product Details

SNP ID

rs542420

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.6:147205372 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

ATGTCAGAGTTAATTAAAAGTGTGC[G/A]TATATATATATATATATATATATAT

Phenotype

MIM: 604586

Polymorphism

G/A, Transition Substitution

Allele Nomenclature

Literature Links

STXBP5 PubMed Links

Additional Information

For this assay, SNP(s) [rs200859878] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

STXBP5

Gene Name

syntaxin binding protein 5

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001127715.2		Intron			NP_001121187.1
NM_139244.4		Intron			NP_640337.3
XM_006715339.2		Intron			XP_006715402.1
XM_011535453.1		Intron			XP_011533755.1
XM_017010267.1		Intron			XP_016865756.1
XM_017010268.1		Intron			XP_016865757.1

Gene

STXBP5-AS1

Gene Name

STXBP5 antisense RNA 1

There are no transcripts associated with this gene.

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