Product Details

SNP ID

rs661985

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.10:6394072 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TAAATTAATACATGAAGAGGCAGGA[A/G]GAAATGATTTCTTAGAATACATGTG

Phenotype

MIM: 600448

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

PRKCQ PubMed Links

Additional Information

For this assay, SNP(s) [rs80185639] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PRKCQ

Gene Name

protein kinase C theta

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001242413.2	2505	Intron			NP_001229342.1
NM_001282644.1	2505	Intron			NP_001269573.1
NM_001282645.1	2505	Intron			NP_001269574.1
NM_001323265.1	2505	Intron			NP_001310194.1
NM_001323266.1	2505	Intron			NP_001310195.1
NM_001323267.1	2505	Intron			NP_001310196.1
NM_006257.4	2505	Intron			NP_006248.1
XM_005252496.4	2505	Intron			XP_005252553.1
XM_005252497.4	2505	UTR 3			XP_005252554.1
XM_006717465.3	2505	Intron			XP_006717528.1
XM_017016410.1	2505	Intron			XP_016871899.1
XM_017016411.1	2505	Intron			XP_016871900.1

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