Product Details

Assay Reference Genome
Location

Chr.17:46031106 on build GRCh38
Cytoband
17q21.31
Species
Homo sapiens
Variation Type
Copy Number

Additional Information

Target Gene Details

Entrez Gene ID
284058
Gene Symbol
KANSL1
Gene Name
KAT8 regulatory NSL complex subunit 1
Gene Aliases
CENP-36, KDVS, KIAA1267, MSL1v1, NSL1, hMSL1v1
Location
Chr.17:46029916-46225374 on build GRCh38
Assay Gene Location
Within Exon 20
Gene Symbol Transcript Accession Exon Location Assay Location Protein ID
KANSL1 NM_001193465.1 16 3942 NP_001180394.1
NM_001193466.1 15 4159 NP_001180395.1
NM_015443.3 15 3861 NP_056258.1
XM_006721823.1 16 3945 XP_006721886.1
XM_006721824.3 16 4129 XP_006721887.1
XM_011524628.2 16 4126 XP_011522930.1
XM_011524629.2 15 4027 XP_011522931.1
XM_011524630.2 15 3940 XP_011522932.1
XM_011524631.2 15 3938 XP_011522933.1
XM_011524632.2 15 2555 XP_011522934.1
AB033093.1 14 3782 BAA86581.1
AK094946.1 7 1660
AK291259.1 15 3919
AK310569.1
AL117476.1 4 1029 CAB55949.1
AL137317.1 11 2103 CAB70694.1
BC035892.1 10 1966 AAH35892.1
BC098376.1 15 3861 AAH98376.1
BX538006.1 15 4162 CAD97958.1
BX648760.1 8 7919 CAH10565.1

Target Copy Number Variation Details

DGV Version
Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv471698 Chr17:46002113 - 46300887 on Build GRCh38 Gain+Loss KANSL1 KANSL1-AS1 MAPT ARL17B LRRC37A
nsv469705 Chr17:45969304 - 46127121 on Build GRCh38 Loss STH KANSL1 MAPT
nsv469537 Chr17:46002112 - 46163353 on Build GRCh38 Gain+Loss KANSL1 MAPT
nsv575142 Chr17:46003698 - 46172742 on Build GRCh38 Loss KANSL1 MAPT
esv2762433 Chr17:45496768 - 46710828 on Build GRCh38 Gain+Loss STH KANSL1 LRRC37A2 MGC57346-CRHR1 KANSL1-AS1 SPPL2C CRHR1 MGC57346 ARL17A MAPT ARL17B LRRC37A LOC107987254 LRRC37A4P NSF MAPT-IT1 LOC644172 CRHR1-IT1 NSFP1 MAPT-AS1 LOC105376839 LOC107987253
nsv1072740 Chr17:45970433 - 46248034 on Build GRCh38 Deletion STH KANSL1 KANSL1-AS1 MAPT
dgv3178n100 Chr17:45877004 - 46034461 on Build GRCh38 Gain STH KANSL1 MAPT-IT1 MAPT-AS1 MAPT
esv2751686 Chr17:45962198 - 46286690 on Build GRCh38 Gain STH KANSL1 KANSL1-AS1 MAPT ARL17B LRRC37A
esv2758692 Chr17:46006548 - 47199967 on Build GRCh38 Gain+Loss WNT9B KANSL1 GOSR2 WNT3 LRRC37A2 KANSL1-AS1 RPS2P47 ARL17A MIR5089 MAPT ARL17B LRRC37A LOC107987254 NSF CDC27 NSFP1 RPRML LOC107987253
dgv128e55 Chr17:46017105 - 46286690 on Build GRCh38 Gain KANSL1 KANSL1-AS1 MAPT ARL17B LRRC37A
dgv127e55 Chr17:45927606 - 46733750 on Build GRCh38 Gain STH KANSL1 NSF LRRC37A2 KANSL1-AS1 NSFP1 ARL17A MAPT ARL17B LRRC37A LOC107987253 LOC107987254

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