Assay Design



Gene Transcripts

Gene Symbol
CRNDE
Entrez Gene ID
643911
Gene Name
colorectal neoplasia differentially expressed (non-protein coding)
Gene Aliases
CRNDEP, LINC00180, NCRNA00180, PNAS-108, lincIRX5
Chromosome Location
Chr.16: 54918863 - 54929189 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001308963.1 NP_001295892.1 1 - 2 287 73
NR_034106.2 1 - 2 287 73
NR_110454.1 1 - 2 287 73
GenBank mRNA BF692451.1 - 1 - 2 288 73
CV575277.1 - 1 - 2 225 73
FJ466685.1 - 1 - 2 60 73
FJ466686.1 - 1 - 2 60 73


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DB452125.1 - 1 - 2 117 Chr. 16 - 54919125 - 54928608 [-] on Build GRCh38 73
GenBankmRNA HY026530.1 - 1 - 2 251 Chr. 16 - 54923582 - 54928741 [-] on Build GRCh38 73
GenBankmRNA BU160166.1 - 1 - 2 76 Chr. 16 - 54918931 - 54928564 [-] on Build GRCh38 73
GenBankmRNA BU165627.1 - 1 - 2 103 Chr. 16 - 54918933 - 54928594 [-] on Build GRCh38 73
GenBankmRNA BU165662.1 - 1 - 2 99 Chr. 16 - 54918944 - 54928589 [-] on Build GRCh38 73
GenBankmRNA HY001098.1 - 1 - 2 99 Chr. 16 - 54919113 - 54928589 [-] on Build GRCh38 73
GenBankmRNA HY030906.1 - 1 - 2 128 Chr. 16 - 54919179 - 54928618 [-] on Build GRCh38 73
GenBankmRNA BI561324.1 - 1 - 2 139 Chr. 16 - 54919149 - 54928627 [-] on Build GRCh38 73
GenBankmRNA BU569024.1 - 1 - 2 97 Chr. 16 - 54918896 - 54928588 [-] on Build GRCh38 73


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream uncharacterized LOC101927480 LOC101927480 -76.8kb Sense Chr. - 54847249 - 54848233 on Build GRCh38
Downstream iroquois homeobox 5 IRX5 HMMS, IRX-2a, IRXB2 2.4kb Anti-sense Chr. - 54931199 - 54934485 on Build GRCh38

View Full Product Details