Assay Design



Gene Transcripts

Gene Symbol
Kcnq1ot1
Entrez Gene ID
63830
Gene Name
KCNQ1 overlapping transcript 1
Gene Aliases
Kvlqt1-as, Lit1, Tssc8
Chromosome Location
Chr.7: 143213111 - 143296547 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NR_001461.5 1 - 1 1862 69
GenBank mRNA AK047831.1 - 1 - 1 1855 69


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA AF119385.1 - 1 3765 Chr. - - [-] on Build 69
GenBankmRNA BU921929.1 - 1 96 Chr. 7 - 143294182 - 143294781 [-] on Build GRCm38 69


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream transient receptor potential cation channel, subfamily M, member 5 Trpm5 9430099A16Rik, LTrpC-5, Ltrpc5, Mtr1 -199.4kb Sense Chr. - 143071529 - 143094642 on Build GRCm38
Downstream RIKEN cDNA 4933417O13 gene 4933417O13Rik 26.2kb Sense Chr. - 143322772 - 143330650 on Build GRCm38

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