Assay Design



Gene Transcripts

Gene Symbol
Socs6
Entrez Gene ID
54607
Gene Name
suppressor of cytokine signaling 6
Gene Aliases
1500012M23Rik, 5830401B18Rik, AI447482, Cis4, Cish4, HSPC060, SOCS-4, SOCS-6, SSI4, STAI4, STATI4, Socs4
Chromosome Location
Chr.18: 88865169 - 88894350 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
GenBank mRNA AK005238.1 - 1 - 1 346 92


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA CB317194.1 - 186 Chr. - - [-] on Build 92
GenBankmRNA CJ245129.1 - 1 104 Chr. 18 - 88865172 - 88865590 [-] on Build GRCm38 92
GenBankmRNA AI448192.1 - 1 Chr. 18 - 88865169 - 88865533 [+] on Build GRCm38 92
GenBankmRNA BY478071.1 - 1 219 Chr. 18 - 88865173 - 88865703 [-] on Build GRCm38 92
GenBankmRNA CJ308617.1 - 1 91 Chr. 18 - 88865173 - 88865577 [-] on Build GRCm38 92
GenBankmRNA AW555072.2 - 1 Chr. 18 - 88865173 - 88865765 [+] on Build GRCm38 92
GenBankmRNA BB767267.1 - 1 222 Chr. 18 - 88865175 - 88865708 [-] on Build GRCm38 92
GenBankmRNA CJ241841.1 - 1 141 Chr. 18 - 88865172 - 88865627 [-] on Build GRCm38 92
GenBankmRNA BG075016.2 - 1 Chr. 18 - 88865173 - 88865722 [+] on Build GRCm38 92
GenBankmRNA CB235792.1 - 153 Chr. - - [-] on Build 92
GenBankmRNA BB670798.1 - 1 132 Chr. 18 - 88865174 - 88865618 [-] on Build GRCm38 92
GenBankmRNA CJ242095.1 - 1 131 Chr. 18 - 88865172 - 88865617 [-] on Build GRCm38 92
GenBankmRNA CJ303039.1 - 1 122 Chr. 18 - 88865173 - 88865608 [-] on Build GRCm38 92
GenBankmRNA AA222060.1 - 1 270 Chr. 18 - 88865300 - 88865756 [-] on Build GRCm38 92


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream cerebellin 2 precursor protein Cbln2 6330593N19Rik, A730004O05 -2.1mb Anti-sense Chr. - 86711053 - 86718285 on Build GRCm38
Downstream rotatin Rttn 4921538A15Rik, AI666264, C530033I08Rik, D230040K24 105.9kb Anti-sense Chr. - 88971738 - 89131016 on Build GRCm38

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