Product Details

SNP ID

rs2242607

Assay Type

Validated

NCBI dbSNP Submissions

NA

Location

Chr.14:73242476 on Build GRCh38

Set Membership

HapMap Validated

Context Sequence [VIC/FAM]

TTGACAACCAGGCCCAACCCAGCAG[C/T]TAAGAAAGCAGCCACCCCTGAAGAC

Phenotype

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

LOC101928123 PubMed Links

Additional Information

For this assay, SNP(s) [rs116826539] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LOC101928123

Gene Name

uncharacterized LOC101928123

There are no transcripts associated with this gene.

Gene

PAPLN

Gene Name

papilin, proteoglycan like sulfated glycoprotein

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_173462.3		Intron			NP_775733.3
XM_011537290.2		Intron			XP_011535592.1
XM_011537291.2		Intron			XP_011535593.1
XM_011537292.2		Intron			XP_011535594.1
XM_011537293.2		Intron			XP_011535595.1
XM_011537294.2		Intron			XP_011535596.1
XM_011537295.2		Intron			XP_011535597.1
XM_011537296.2		Intron			XP_011535598.1
XM_017021749.1		Intron			XP_016877238.1
XM_017021750.1		Intron			XP_016877239.1

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