Product Details

SNP ID
rs5998523
Assay Type
Functionally Tested
NCBI dbSNP Submissions
NA
Location
Chr.22:32512018 on Build GRCh38
Set Membership
HapMap
Context Sequence [VIC/FAM]
CTGACCCAGTCTCCAGCCAATAGCC[C/T]GTCAAAAGCCAGCTTGAAGGCAGGC
Phenotype
MIM: 602705
Polymorphism
C/T, Transition Substitution
Allele Nomenclature
Literature Links
SYN3 PubMed Links
Additional Information
For this assay, SNP(s) [rs147511992] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene
SYN3
Gene Name
synapsin III
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_001135774.1 4085 Intron NP_001129246.1
NM_003490.3 4085 Intron NP_003481.3
NM_133633.2 4085 Intron NP_598344.2
XM_011530405.2 4085 UTR 3 XP_011528707.1
XM_011530406.2 4085 UTR 3 XP_011528708.1
XM_011530407.2 4085 UTR 3 XP_011528709.1
XM_011530408.1 4085 UTR 3 XP_011528710.1
XM_011530410.2 4085 UTR 3 XP_011528712.1
XM_017028960.1 4085 UTR 3 XP_016884449.1
XM_017028961.1 4085 UTR 3 XP_016884450.1
XM_017028962.1 4085 UTR 3 XP_016884451.1
XM_017028963.1 4085 UTR 3 XP_016884452.1
XM_017028964.1 4085 UTR 3 XP_016884453.1
XM_017028965.1 4085 UTR 3 XP_016884454.1

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