Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
SNORD99
Entrez Gene ID
692212
Gene Name
small nucleolar RNA, C/D box 99
Gene Aliases
HBII-420
Chromosome Location
Chr.1: 28578743 - 28578822 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NR_003077.1 1 - 1 43 73


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BU075138.1 - 1 Chr. 1 - 28578538 - 28579068 [+] on Build GRCh38 73
GenBankmRNA CB119876.1 - 1 Chr. 1 - 28578536 - 28578892 [+] on Build GRCh38 73
GenBankmRNA BM263047.1 - 1 454 Chr. 1 - 28578708 - 28579217 [-] on Build GRCh38 73
GenBankmRNA AA417948.1 - 1 Chr. 1 - 28578538 - 28578950 [+] on Build GRCh38 73
GenBankmRNA BU075449.1 - 1 325 Chr. 1 - 28578607 - 28579104 [-] on Build GRCh38 73
GenBankmRNA BM747774.1 - 1 134 Chr. 1 - 28578538 - 28578912 [-] on Build GRCh38 73
GenBankmRNA CA430974.1 - 1 Chr. 1 - 28578541 - 28579175 [+] on Build GRCh38 73
GenBankmRNA BX116925.1 - 2 622 Chr. 1 - 28578631 - 28841889 [-] on Build GRCh38 73
GenBankmRNA BU675242.1 - 1 Chr. 1 - 28578536 - 28579264 [+] on Build GRCh38 73
GenBankmRNA AI401149.1 - 1 Chr. 1 - 28578539 - 28578934 [+] on Build GRCh38 73
GenBankmRNA BM142620.1 - 1 Chr. 1 - 28578538 - 28579044 [+] on Build GRCh38 73


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream small nucleolar RNA host gene 12 SNHG12 ASLNC04080, C1orf79, LINC00100, NCRNA00100 Sense Chr. - 28578538 - 28581854 on Build GRCh38
Downstream small nucleolar RNA, H/ACA box 61 SNORA61 ACA61 942.0 Sense Chr. - 28579764 - 28579893 on Build GRCh38

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