Product Details

SNP ID

rs79642041

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.16:4260216 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GCGGTGCTGGCACGATCACCGTGGG[A/G]TGGTGGGTGGGGGCCGGAGGGGGCA

Phenotype

MIM: 600743

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

LINC01569 PubMed Links

Additional Information

For this assay, SNP(s) [rs528385650] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LINC01569

Gene Name

long intergenic non-protein coding RNA 1569

There are no transcripts associated with this gene.

Gene

LOC105371063

Gene Name

putative uncharacterized protein encoded by LINC00596

There are no transcripts associated with this gene.

Gene

TFAP4

Gene Name

transcription factor AP-4 (activating enhancer binding protein 4)

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_003223.2	1086	Silent Mutation	CAC,CAT	H232H	NP_003214.1
XM_011522633.2	1086	Silent Mutation	CAC,CAT	H219H	XP_011520935.1
XM_011522635.2	1086	Silent Mutation	CAC,CAT	H172H	XP_011520937.1

View Full Product Details