Product Details

SNP ID

rs79408814

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.5:146447386 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

TGGCGGGGACGGGGGCGAGAGTGAA[A/C]GATTCAACCCGGGGGAGCTCAGGTA

Phenotype

MIM: 605409

Polymorphism

A/C, Transversion Substitution

Allele Nomenclature

Literature Links

TCERG1 PubMed Links

Additional Information

For this assay, SNP(s) [rs6884478] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

TCERG1

Gene Name

transcription elongation regulator 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001040006.1	263	Silent Mutation	AGA,CGA	R13R	NP_001035095.1
NM_006706.3	263	Silent Mutation	AGA,CGA	R13R	NP_006697.2
XM_005268365.2	263	Silent Mutation	AGA,CGA	R13R	XP_005268422.1
XM_017008977.1	263	Silent Mutation	AGA,CGA	R13R	XP_016864466.1
XM_017008978.1	263	Silent Mutation	AGA,CGA	R13R	XP_016864467.1
XM_017008979.1	263	Silent Mutation	AGA,CGA	R13R	XP_016864468.1
XM_017008980.1	263	Silent Mutation	AGA,CGA	R13R	XP_016864469.1
XM_017008981.1	263	Intron			XP_016864470.1
XM_017008982.1	263	Intron			XP_016864471.1
XM_017008983.1	263	Intron			XP_016864472.1
XM_017008984.1	263	Silent Mutation	AGA,CGA	R13R	XP_016864473.1
XM_017008985.1	263	Silent Mutation	AGA,CGA	R13R	XP_016864474.1

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