Product Details

SNP ID

rs75149861

Assay Type

Functionally Tested

NCBI dbSNP Submissions

19

Location

Chr.1:227732652 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

AAGTGGTAAAACTCTTCAAAGTTGA[C/T]GCCCGAGCAGGACCTCATGATGACC

Phenotype

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

JMJD4 PubMed Links

Additional Information

For this assay, SNP(s) [rs4837] are located under a probe and SNP(s) [rs751748] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

JMJD4

Gene Name

jumonji domain containing 4

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001161465.1	502	Missense Mutation	ATC,GTC	I362V	NP_001154937.1
NM_023007.2	502	Missense Mutation	ATC,GTC	I378V	NP_075383.2
XM_011544262.2	502	Missense Mutation	ATC,GTC	I329V	XP_011542564.1

Gene

SNAP47

Gene Name

synaptosome associated protein 47

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001323930.1	502	Intron			NP_001310859.1
NM_001323931.1	502	Intron			NP_001310860.1
NM_001323932.1	502	Intron			NP_001310861.1
NM_001323933.1	502	Intron			NP_001310862.1
NM_001323934.1	502	Intron			NP_001310863.1
NM_001323935.1	502	Intron			NP_001310864.1
NM_053052.3	502	Intron			NP_444280.2
XM_006711734.3	502	Intron			XP_006711797.1
XM_017000231.1	502	UTR 5			XP_016855720.1
XM_017000232.1	502	UTR 5			XP_016855721.1

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