Product Details

SNP ID

rs115711928

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.3:113002627 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GGCAAGAATGCTGTTTACAACTTAG[C/T]CTATAACTTGCTTAAGGCCAGGATT

Phenotype

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

GTPBP8 PubMed Links

Additional Information

For this assay, SNP(s) [rs540943380,rs543851767] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

GTPBP8

Gene Name

GTP binding protein 8 (putative)

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_014170.2	4674	Intron			NP_054889.2
NM_138485.1	4674	Intron			NP_612494.1

Gene

NEPRO

Gene Name

nucleolus and neural progenitor protein

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001319109.1	4674	UTR 3			NP_001306038.1
NM_001319110.1	4674	UTR 3			NP_001306039.1
NM_001319111.1	4674	UTR 3			NP_001306040.1
NM_001319112.1	4674	UTR 3			NP_001306041.1
NM_001319114.1	4674	UTR 3			NP_001306043.1
NM_001319115.1	4674	UTR 3			NP_001306044.1
NM_015412.3	4674	UTR 3			NP_056227.2
XM_005247276.2	4674	Intron			XP_005247333.1
XM_011512635.2	4674	Intron			XP_011510937.1
XM_011512636.2	4674	Intron			XP_011510938.1
XM_011512638.2	4674	Intron			XP_011510940.1
XM_017006102.1	4674	UTR 3			XP_016861591.1
XM_017006103.1	4674	Intron			XP_016861592.1

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