Product Details

SNP ID
rs111661522
Assay Type
Functionally Tested
NCBI dbSNP Submissions
NA
Location
Chr.17:3609393 on Build GRCh38
Set Membership
Context Sequence [VIC/FAM]
ACTCGTGGTTGCCAGCGTGACTCTG[G/T]GCCAGGCCTGCCTGAGCCTGGGCTC
Phenotype
MIM: 605060 MIM: 602076
Polymorphism
G/T, Transversion Substitution
Allele Nomenclature
Literature Links
SHPK PubMed Links
Additional Information
For this assay, SNP(s) [rs3840876] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene
SHPK
Gene Name
sedoheptulokinase
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_013276.2 19 UTR 3 NP_037408.2
Gene
TRPV1
Gene Name
transient receptor potential cation channel subfamily V member 1
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_018727.5 19 Intron NP_061197.4
NM_080704.3 19 UTR 5 NP_542435.2
NM_080705.3 19 Intron NP_542436.2
NM_080706.3 19 Intron NP_542437.2

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