Product Details

SNP ID

rs116527960

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.18:79902982 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CCCCCCACTCAGGAATTTGCTTCAG[C/G]CCAAAAGCCCAGGGCAGCAGGGTAA

Phenotype

MIM: 605696

Polymorphism

C/G, Transversion Substitution

Allele Nomenclature

Literature Links

KCNG2 PubMed Links

Additional Information

For this assay, SNP(s) [rs537273482] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

KCNG2

Gene Name

potassium voltage-gated channel modifier subfamily G member 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_012283.1	1852	Intron			NP_036415.1

Gene

PQLC1

Gene Name

PQ loop repeat containing 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001146343.1	1852	UTR 3			NP_001139815.1
NM_001146345.1	1852	UTR 3			NP_001139817.1
NM_025078.4	1852	UTR 3			NP_079354.2
XM_005266770.2	1852	UTR 3			XP_005266827.1
XM_011526188.1	1852	UTR 3			XP_011524490.1
XM_017025997.1	1852	UTR 3			XP_016881486.1
XM_017025998.1	1852	UTR 3			XP_016881487.1
XM_017025999.1	1852	Intron			XP_016881488.1
XM_017026000.1	1852	Intron			XP_016881489.1
XM_017026001.1	1852	UTR 3			XP_016881490.1
XM_017026002.1	1852	Intron			XP_016881491.1
XM_017026003.1	1852	UTR 3			XP_016881492.1
XM_017026004.1	1852	UTR 3			XP_016881493.1
XM_017026005.1	1852	UTR 3			XP_016881494.1

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