Product Details

SNP ID

rs113570783

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.10:101010532 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

TCTACCTGGAGACTTGCCTTGACCC[C/T]GGCTGCTGCGGCTGCGGCTGCGGCT

Phenotype

MIM: 610454 MIM: 612971

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

LZTS2 PubMed Links

Additional Information

For this assay, SNP(s) [rs200896335] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LZTS2

Gene Name

leucine zipper tumor suppressor 2

There are no transcripts associated with this gene.

Gene

PDZD7

Gene Name

PDZ domain containing 7

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001195263.1	2579	Missense Mutation	CAG,CGG	Q786R	NP_001182192.1
NM_024895.4	2579	Intron			NP_079171.1
XM_005270165.2	2579	Intron			XP_005270222.1
XM_011540177.2	2579	Missense Mutation	CAG,CGG	Q786R	XP_011538479.1
XM_011540178.2	2579	Missense Mutation	CAG,CGG	Q785R	XP_011538480.1
XM_011540179.2	2579	Intron			XP_011538481.1
XM_011540181.2	2579	Intron			XP_011538483.1
XM_011540182.2	2579	Intron			XP_011538484.1
XM_011540183.2	2579	Intron			XP_011538485.1
XM_017016667.1	2579	Intron			XP_016872156.1
XM_017016668.1	2579	Intron			XP_016872157.1

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