Product Details

SNP ID

rs114123380

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.10:68566899 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CCTATTTATGAAACACCTATCATGC[A/G]CCAGCCCTGTGCTAAGCCTTTACAC

Phenotype

MIM: 607790

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

TET1 PubMed Links

Additional Information

For this assay, SNP(s) [rs562716110] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

TET1

Gene Name

tet methylcytosine dioxygenase 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_030625.2		Intron			NP_085128.2
XM_011540204.2		Intron			XP_011538506.1
XM_011540205.2		Intron			XP_011538507.1
XM_011540206.2		Intron			XP_011538508.1
XM_011540207.2		Intron			XP_011538509.1
XM_017016686.1		Intron			XP_016872175.1
XM_017016687.1		Intron			XP_016872176.1
XM_017016688.1		Intron			XP_016872177.1
XM_017016689.1		Intron			XP_016872178.1

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