Product Details

SNP ID

rs149241583

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.11:67405649 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GTGGATGGAGACCATTGGCAGGGAC[C/T]TGCACCGTCAATTCCCTCTGCACGA

Phenotype

MIM: 176875 MIM: 603761 MIM: 610831

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

PPP1CA PubMed Links

Additional Information

For this assay, SNP(s) [rs12805811] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PPP1CA

Gene Name

protein phosphatase 1 catalytic subunit alpha

There are no transcripts associated with this gene.

Gene

RAD9A

Gene Name

RAD9 checkpoint clamp component A

There are no transcripts associated with this gene.

Gene

TBC1D10C

Gene Name

TBC1 domain family member 10C

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001256508.1	731	Silent Mutation	CTG,TTG	L139L	NP_001243437.1
NM_198517.3	731	Silent Mutation	CTG,TTG	L139L	NP_940919.1
XM_006718538.3	731	Silent Mutation	CTG,TTG	L139L	XP_006718601.1
XM_006718539.3	731	Silent Mutation	CTG,TTG	L139L	XP_006718602.1
XM_006718540.3	731	Silent Mutation	CTG,TTG	L139L	XP_006718603.1
XM_006718541.3	731	Missense Mutation	CCT,CTT	P39L	XP_006718604.1
XM_006718542.3	731	Missense Mutation	CCT,CTT	P39L	XP_006718605.1
XM_006718543.2	731	Missense Mutation	CCT,CTT	P39L	XP_006718606.1
XM_006718544.3	731	Missense Mutation	CCT,CTT	P39L	XP_006718607.1
XM_011545001.2	731	Missense Mutation	CCT,CTT	P39L	XP_011543303.1
XM_011545002.2	731	Silent Mutation	CTG,TTG	L139L	XP_011543304.1

View Full Product Details