Product Details

SNP ID

rs150885335

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.11:33859467 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CACAGAAATGCTTCTGACAGGCGGC[A/G]CATTTGAAACATTCCAGGTGATACA

Phenotype

MIM: 180385

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

LMO2 PubMed Links

Additional Information

For this assay, SNP(s) [rs3740617] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LMO2

Gene Name

LIM domain only 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001142315.1	1157	Silent Mutation			NP_001135787.1
NM_001142316.1	1157	Silent Mutation			NP_001135788.1
NM_005574.3	1157	Silent Mutation			NP_005565.2
XM_005252921.2	1157	Silent Mutation			XP_005252978.1
XM_017017727.1	1157	Silent Mutation			XP_016873216.1
XM_017017728.1	1157	Silent Mutation			XP_016873217.1
XM_017017729.1	1157	Silent Mutation			XP_016873218.1
XM_017017730.1	1157	Silent Mutation			XP_016873219.1
XM_017017731.1	1157	Silent Mutation			XP_016873220.1
XM_017017732.1	1157	Silent Mutation			XP_016873221.1
XM_017017733.1	1157	Silent Mutation			XP_016873222.1

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