Product Details

SNP ID

rs139874813

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.15:79898996 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GTCAGAAAAATTAGGCCGGTTTCAC[A/G]ATATGGAGTGTCCTTTCTGGTCAAC

Phenotype

MIM: 604197

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

MTHFS PubMed Links

Additional Information

For this assay, SNP(s) [rs7257] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

MTHFS

Gene Name

5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)

There are no transcripts associated with this gene.

Gene

ST20

Gene Name

suppressor of tumorigenicity 20

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001100879.1	855	Missense Mutation	CGT,TGT	R59C	NP_001094349.1
NM_001100880.2	855	Missense Mutation	CGT,TGT	R59C	NP_001094350.1
NM_001199757.1	855	Missense Mutation	CGT,TGT	R59C	NP_001186686.1

Gene

ST20-MTHFS

Gene Name

ST20-MTHFS readthrough

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001199760.1	855	Intron			NP_001186689.1

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