Product Details

SNP ID
rs141243867
Assay Type
Functionally Tested
NCBI dbSNP Submissions
NA
Location
Chr.15:83112875 on Build GRCh38
Set Membership
Context Sequence [VIC/FAM]
TGGCTCGTGTCCTCGTCAAAAGAAA[A/G]CCACCCCGGGACCCACTGTTCTATG
Phenotype
MIM: 616643 MIM: 606562
Polymorphism
A/G, Transition Substitution
Allele Nomenclature
Literature Links
HDGFRP3 PubMed Links
Additional Information
For this assay, SNP(s) [rs1989] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene
HDGFRP3
Gene Name
hepatoma-derived growth factor, related protein 3
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_016073.3 3613 Intron NP_057157.1
XM_006720554.3 3613 UTR 3 XP_006720617.1
Gene
LOC105370931
Gene Name
uncharacterized LOC105370931
There are no transcripts associated with this gene.

Gene
TM6SF1
Gene Name
transmembrane 6 superfamily member 1
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_001144903.1 3613 Silent Mutation AAA,AAG K57K NP_001138375.1
NM_023003.3 3613 Silent Mutation AAA,AAG K57K NP_075379.2
XM_011521679.2 3613 Silent Mutation AAA,AAG K57K XP_011519981.1
XM_011521680.2 3613 Silent Mutation AAA,AAG K57K XP_011519982.1
XM_017022320.1 3613 Silent Mutation AAA,AAG K57K XP_016877809.1
XM_017022321.1 3613 Silent Mutation AAA,AAG K57K XP_016877810.1
XM_017022322.1 3613 Silent Mutation AAA,AAG K57K XP_016877811.1
XM_017022323.1 3613 UTR 5 XP_016877812.1
XM_017022324.1 3613 UTR 5 XP_016877813.1
XM_017022325.1 3613 UTR 5 XP_016877814.1
XM_017022326.1 3613 UTR 5 XP_016877815.1
XM_017022327.1 3613 UTR 5 XP_016877816.1
XM_017022328.1 3613 Silent Mutation AAA,AAG K57K XP_016877817.1
XM_017022329.1 3613 Silent Mutation AAA,AAG K57K XP_016877818.1
XM_017022330.1 3613 Silent Mutation AAA,AAG K57K XP_016877819.1
XM_017022331.1 3613 Silent Mutation AAA,AAG K57K XP_016877820.1

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