Product Details

SNP ID

rs149766448

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.15:50282258 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

ATACATAAAAACACTAATTTAAAAA[A/G]AGAGAGAGAAGAGATATGACCTGGA

Phenotype

MIM: 600610

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

GABPB1 PubMed Links

Additional Information

For this assay, SNP(s) [rs143952594] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

GABPB1

Gene Name

GA binding protein transcription factor beta subunit 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001320910.1		Intron			NP_001307839.1
NM_001320915.1		Intron			NP_001307844.1
NM_002041.4		Intron			NP_002032.2
NM_005254.5		Intron			NP_005245.2
NM_016654.4		Intron			NP_057738.1
NM_016655.4		Intron			NP_057739.1
NM_181427.3		Intron			NP_852092.1
XM_005254274.3		Intron			XP_005254331.1
XM_011521426.2		Intron			XP_011519728.1
XM_017022053.1		Intron			XP_016877542.1
XM_017022054.1		Intron			XP_016877543.1

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