Product Details
- SNP ID
-
rs139908935
- Assay Type
- Functionally Tested
- NCBI dbSNP Submissions
-
NA
- Location
-
Chr.17:73242954 on Build GRCh38
- Set Membership
-
- Context Sequence [VIC/FAM]
- GTGGATTCGGTGGCATCACGATGCT[C/T]TTCACAGGATACTTCGTCCTGTGTT
- Phenotype
-
- Polymorphism
- C/T, Transition Substitution
- Allele Nomenclature
-
- Literature Links
-
C17orf80
PubMed Links
- Additional Information
-
For this assay, SNP(s) [rs1566290] are located under a probe and SNP(s) [rs2270728] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Gene Details
- Gene
- C17orf80
- Gene Name
- chromosome 17 open reading frame 80
Transcript Accession |
SNP Location |
SNP Type |
Codon Change |
Amino Acid Change |
Protein ID |
NM_001100621.2 |
1815 |
Silent Mutation |
CTC,CTT |
L524L |
NP_001094091.1 |
NM_001100622.2 |
1815 |
Silent Mutation |
CTC,CTT |
L560L |
NP_001094092.1 |
NM_001288770.1 |
1815 |
Silent Mutation |
CTC,CTT |
L524L |
NP_001275699.1 |
NM_001288771.1 |
1815 |
Silent Mutation |
CTC,CTT |
L524L |
NP_001275700.1 |
NM_017941.5 |
1815 |
Silent Mutation |
CTC,CTT |
L560L |
NP_060411.2 |
XM_005257487.3 |
1815 |
Silent Mutation |
CTC,CTT |
L560L |
XP_005257544.1 |
XM_006721966.3 |
1815 |
Silent Mutation |
CTC,CTT |
L524L |
XP_006722029.1 |
XM_011524961.1 |
1815 |
Silent Mutation |
CTC,CTT |
L560L |
XP_011523263.1 |
XM_011524962.2 |
1815 |
Silent Mutation |
CTC,CTT |
L560L |
XP_011523264.1 |
XM_017024806.1 |
1815 |
Silent Mutation |
CTC,CTT |
L560L |
XP_016880295.1 |
- Gene
- CPSF4L
- Gene Name
- cleavage and polyadenylation specific factor 4 like
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