Product Details

SNP ID

rs114769211

Assay Type

Functionally Tested

NCBI dbSNP Submissions

7

Location

Chr.1:108931679 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

ACAACCTGGATTACATTATGTTTCA[C/T]GTATACTATAAGGTATGATGTCCTG

Phenotype

MIM: 609245

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

CLCC1 PubMed Links

Additional Information

For this assay, SNP(s) [rs145659672] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CLCC1

Gene Name

chloride channel CLIC like 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001048210.2	2172	UTR 3			NP_001041675.1
NM_001278202.1	2172	UTR 3			NP_001265131.1
NM_001278203.1	2172	UTR 3			NP_001265132.1
NM_015127.4	2172	UTR 3			NP_055942.1

Gene

GPSM2

Gene Name

G-protein signaling modulator 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001321038.1	2172	Intron			NP_001307967.1
NM_001321039.1	2172	UTR 3			NP_001307968.1
NM_013296.4	2172	Intron			NP_037428.3
XM_006710589.2	2172	Intron			XP_006710652.1
XM_011541301.2	2172	Intron			XP_011539603.1
XM_011541302.2	2172	Intron			XP_011539604.1
XM_011541303.2	2172	Intron			XP_011539605.1
XM_017001097.1	2172	Intron			XP_016856586.1
XM_017001098.1	2172	Intron			XP_016856587.1

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