Product Details

SNP ID

rs142084255

Assay Type

Functionally Tested

NCBI dbSNP Submissions

11

Location

Chr.1:13583924 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CCTGCTCCCACCCCTCCGGCCCCCC[C/G]ACCGTCGCGCTCCTCCAGGCTGGGC

Phenotype

MIM: 608863

Polymorphism

C/G, Transversion Substitution

Allele Nomenclature

Literature Links

PDPN PubMed Links

Additional Information

For this assay, SNP(s) [rs355025] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PDPN

Gene Name

podoplanin

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001006624.1	168	Intron			NP_001006625.1
NM_001006625.1	168	Intron			NP_001006626.1
NM_006474.4	168	Missense Mutation	CCA,CGA	P40R	NP_006465.3
NM_198389.2	168	Missense Mutation	CCA,CGA	P40R	NP_938203.2
XM_006710295.1	168	Intron			XP_006710358.1

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