Product Details

SNP ID

rs142022310

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.20:3044467 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CTCCTGCTGCTGCTGACTGCCCACC[C/T]TGGACCCTCAGAGGCTCAGCACTGG

Phenotype

MIM: 602352 MIM: 611988 MIM: 176884

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

GNRH2 PubMed Links

Additional Information

For this assay, SNP(s) [rs6051545] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

GNRH2

Gene Name

gonadotropin releasing hormone 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001310220.1	104	Missense Mutation	CCT,CTT	P18L	NP_001297149.1
NM_001501.1	104	Missense Mutation	CCT,CTT	P18L	NP_001492.1
NM_178331.1	104	Missense Mutation	CCT,CTT	P18L	NP_847901.1
NM_178332.1	104	Missense Mutation	CCT,CTT	P18L	NP_847902.1
XM_017027823.1	104	Missense Mutation	CCT,CTT	P18L	XP_016883312.1

Gene

MRPS26

Gene Name

mitochondrial ribosomal protein S26

There are no transcripts associated with this gene.

Gene

PTPRA

Gene Name

protein tyrosine phosphatase, receptor type A

There are no transcripts associated with this gene.

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