Product Details

SNP ID

rs146821586

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.20:45886938 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CACATGCGGGAATTTGTGGCAGTTT[C/T]GGCTGTATTCCTTCCGTAGTGTCTC

Phenotype

MIM: 613111 MIM: 608597

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

CTSA PubMed Links

Additional Information

For this assay, SNP(s) [rs3827040] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CTSA

Gene Name

cathepsin A

There are no transcripts associated with this gene.

Gene

NEURL2

Gene Name

neuralized E3 ubiquitin protein ligase 2

There are no transcripts associated with this gene.

Gene

SPATA25

Gene Name

spermatogenesis associated 25

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_080608.3	272	Missense Mutation	CAA,CGA	Q88R	NP_542175.1

Gene

ZSWIM1

Gene Name

zinc finger SWIM-type containing 1

There are no transcripts associated with this gene.

Gene

ZSWIM3

Gene Name

zinc finger SWIM-type containing 3

There are no transcripts associated with this gene.

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