Product Details

SNP ID

rs141367491

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.2:132644852 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

ATTAACAGACATCAACTGGTATAAA[C/T]ACACTGTCTAAAGCATTTAATGGTC

Phenotype

MIM: 602886 MIM: 610450

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

GPR39 PubMed Links

Additional Information

For this assay, SNP(s) [rs71929358] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

GPR39

Gene Name

G protein-coupled receptor 39

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001508.2	1968	Intron			NP_001499.1
XM_011511021.2	1968	Intron			XP_011509323.1

Gene

LYPD1

Gene Name

LY6/PLAUR domain containing 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001077427.3	1968	UTR 3			NP_001070895.1
NM_001321234.1	1968	UTR 3			NP_001308163.1
NM_001321235.1	1968	UTR 3			NP_001308164.1
NM_144586.6	1968	UTR 3			NP_653187.3
XM_011510546.2	1968	UTR 3			XP_011508848.1

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