Product Details

SNP ID

rs140433888

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.3:66380395 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

TGGAAACAAGCAAGTACTGGGCTTC[C/T]GCGCGCTCTGGACTGCCTGAAGTTA

Phenotype

MIM: 608868 MIM: 611037

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

LRIG1 PubMed Links

Additional Information

For this assay, SNP(s) [rs2279290] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LRIG1

Gene Name

leucine rich repeats and immunoglobulin like domains 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_015541.2	3690	Silent Mutation	GCA,GCG	A1050A	NP_056356.2
XM_011533578.1	3690	Silent Mutation	GCA,GCG	A1002A	XP_011531880.1
XM_011533579.2	3690	Silent Mutation	GCA,GCG	A790A	XP_011531881.1
XM_017006134.1	3690	Silent Mutation	GCA,GCG	A1025A	XP_016861623.1
XM_017006135.1	3690	Silent Mutation	GCA,GCG	A824A	XP_016861624.1
XM_017006136.1	3690	Silent Mutation	GCA,GCG	A790A	XP_016861625.1

Gene

SLC25A26

Gene Name

solute carrier family 25 member 26

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001164796.1	3690	Intron			NP_001158268.1
NM_173471.3	3690	Intron			NP_775742.4
XM_006712956.1	3690	Intron			XP_006713019.1
XM_011533327.2	3690	Intron			XP_011531629.1
XM_011533328.1	3690	Intron			XP_011531630.1
XM_017005671.1	3690	Intron			XP_016861160.1
XM_017005672.1	3690	Intron			XP_016861161.1
XM_017005673.1	3690	Intron			XP_016861162.1
XM_017005674.1	3690	Intron			XP_016861163.1

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