Product Details

SNP ID

rs139156024

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.4:122923213 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

AATGGTTCGTCCTTGCCCTCTGCTG[C/G]TTCCTCTTGTGCGGAGGCACGGGCT

Phenotype

MIM: 606261 MIM: 613940

Polymorphism

C/G, Transversion Substitution

Allele Nomenclature

Literature Links

NUDT6 PubMed Links

Additional Information

For this assay, SNP(s) [rs35430470] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

NUDT6

Gene Name

nudix hydrolase 6

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_007083.4	144	Intron			NP_009014.2
NM_198041.2	144	Intron			NP_932158.1

Gene

SPATA5

Gene Name

spermatogenesis associated 5

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001317799.1	144	Missense Mutation	GCT,GGT	A24G	NP_001304728.1
NM_145207.2	144	Missense Mutation	GCT,GGT	A24G	NP_660208.2
XM_005262783.4	144	Missense Mutation	GCT,GGT	A24G	XP_005262840.1
XM_011531678.2	144	Missense Mutation	GCT,GGT	A24G	XP_011529980.1
XM_011531679.2	144	Missense Mutation	GCT,GGT	A24G	XP_011529981.1
XM_017007825.1	144	Missense Mutation	GCT,GGT	A24G	XP_016863314.1
XM_017007826.1	144	Missense Mutation	GCT,GGT	A24G	XP_016863315.1
XM_017007827.1	144	Missense Mutation	GCT,GGT	A24G	XP_016863316.1
XM_017007828.1	144	UTR 5			XP_016863317.1
XM_017007829.1	144	Intron			XP_016863318.1
XM_017007830.1	144	Missense Mutation	GCT,GGT	A24G	XP_016863319.1

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