Product Details

SNP ID
rs11593448
Assay Type
Functionally Tested
NCBI dbSNP Submissions
NA
Location
Chr.10:98458266 on Build GRCh38
Set Membership
Context Sequence [VIC/FAM]
TCTCCTCCTTCTAACAAAAGCATCA[C/T]TCCTGTCATTTATCCTGAGAAAGAA
Phenotype
MIM: 613469
Polymorphism
C/T, Transition Substitution
Allele Nomenclature
Literature Links
HPSE2 PubMed Links
Additional Information
For this assay, SNP(s) [rs140887054] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene
HPSE2
Gene Name
heparanase 2 (inactive)
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_001166244.1 3013 UTR 3 NP_001159716.1
NM_001166245.1 3013 UTR 3 NP_001159717.1
NM_001166246.1 3013 UTR 3 NP_001159718.1
NM_021828.4 3013 UTR 3 NP_068600.4
XM_006717937.2 3013 UTR 3 XP_006718000.1
XM_011540029.1 3013 UTR 3 XP_011538331.1
XM_011540030.1 3013 UTR 3 XP_011538332.1
XM_011540031.2 3013 UTR 3 XP_011538333.1
XM_011540033.2 3013 UTR 3 XP_011538335.1
XM_017016495.1 3013 Intron XP_016871984.1
XM_017016496.1 3013 Intron XP_016871985.1
XM_017016497.1 3013 UTR 3 XP_016871986.1
XM_017016498.1 3013 UTR 3 XP_016871987.1
Gene
LOC101927278
Gene Name
uncharacterized LOC101927278
There are no transcripts associated with this gene.

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