Product Details

SNP ID

rs181607175

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.22:25354688 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CCGGTTGGCCTTGACCTTGTGTACC[C/T]GCTTGATGCTGTGGTGCTGCCAGGC

Phenotype

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

LOC100652901 PubMed Links

Additional Information

For this assay, SNP(s) [rs2294372] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LOC100652901

Gene Name

uncharacterized LOC100652901

There are no transcripts associated with this gene.

Gene

LRP5L

Gene Name

LDL receptor related protein 5 like

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001135772.1	3689	Missense Mutation	CAG,CGG	Q188R	NP_001129244.1
NM_182492.2	3689	Intron			NP_872298.1
XM_006724372.3	3689	Missense Mutation	CAG,CGG	Q188R	XP_006724435.1
XM_017029083.1	3689	Missense Mutation	CAG,CGG	Q188R	XP_016884572.1
XM_017029084.1	3689	Missense Mutation	CAG,CGG	Q188R	XP_016884573.1
XM_017029085.1	3689	Missense Mutation	CAG,CGG	Q188R	XP_016884574.1
XM_017029086.1	3689	Missense Mutation	CAG,CGG	Q188R	XP_016884575.1
XM_017029087.1	3689	Missense Mutation	CAG,CGG	Q188R	XP_016884576.1
XM_017029088.1	3689	Missense Mutation	CAG,CGG	Q188R	XP_016884577.1

View Full Product Details