Product Details

SNP ID

rs7644984

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.3:130854152 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

ATAGGTTGGTAGGTTATTTATCAAA[C/T]TGAGAACAAATATTTCATCCTTTGC

Phenotype

MIM: 604384

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

ATP2C1 PubMed Links

Additional Information

For this assay, SNP(s) [rs2307759] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

ATP2C1

Gene Name

ATPase secretory pathway Ca2+ transporting 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001001485.2		Intron			NP_001001485.1
NM_001001486.1		Intron			NP_001001486.1
NM_001001487.1		Intron			NP_001001487.1
NM_001199179.1		Intron			NP_001186108.1
NM_001199180.1		Intron			NP_001186109.1
NM_001199181.1		Intron			NP_001186110.1
NM_001199182.1		Intron			NP_001186111.1
NM_001199183.1		Intron			NP_001186112.1
NM_001199184.1		Intron			NP_001186113.1
NM_001199185.1		Intron			NP_001186114.1
NM_014382.3		Intron			NP_055197.2
XM_005247354.2		Intron			XP_005247411.1
XM_005247355.2		Intron			XP_005247412.1
XM_005247356.2		Intron			XP_005247413.1
XM_005247358.2		Intron			XP_005247415.1
XM_011512686.2		Intron			XP_011510988.1
XM_017006164.1		Intron			XP_016861653.1

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